PAMI.partialPeriodicPattern.basic package

Submodules

PAMI.partialPeriodicPattern.basic.GThreePGrowth module

class PAMI.partialPeriodicPattern.basic.GThreePGrowth.GThreePGrowth(iFile: str, minPS: int | float | str, period: int | float | str, relativePS: bool, sep: str = '\t')[source]

Bases: _partialPeriodicPatterns

Description:

3pgrowth is fundamental approach to mine the partial periodic patterns in temporal database.

Reference:

Reference : Discovering Partial Periodic Itemsets in Temporal Databases,SSDBM ‘17: Proceedings of the 29th International Conference on Scientific and Statistical Database ManagementJune 2017 Article No.: 30 Pages 1–6https://doi.org/10.1145/3085504.3085535

Parameters:

iFile – str : Name of the Input file to mine complete set of frequent pattern’s
oFile – str : Name of the output file to store complete set of frequent patterns
minPS – float: Minimum partial periodic pattern…
period – float: Minimum partial periodic…
sep – str : This variable is used to distinguish items from one another in a transaction. The default seperator is tab space. However, the users can override their default separator.

Attributes:

self.iFilefile: Name of the Input file or path of the input file
self. oFilefile: Name of the output file or path of the output file
minPS: float or int or str: The user can specify minPS either in count or proportion of database size. If the program detects the data type of minPS is integer, then it treats minPS is expressed in count. Otherwise, it will be treated as float. Example: minPS=10 will be treated as integer, while minPS=10.0 will be treated as float
period: float or int or str: The user can specify period either in count or proportion of database size. If the program detects the data type of period is integer, then it treats period is expressed in count. Otherwise, it will be treated as float. Example: period=10 will be treated as integer, while period=10.0 will be treated as float
sepstr: This variable is used to distinguish items from one another in a transaction. The default seperator is tab space or . However, the users can override their default separator.
self.memoryUSSfloat: To store the total amount of USS memory consumed by the program
self.memoryRSSfloat: To store the total amount of RSS memory consumed by the program
self.startTime:float: To record the start time of the mining process
self.endTime:float: To record the completion time of the mining process
Databaselist: To store the transactions of a database in list
mapSupportDictionary: To maintain the information of item and their frequency
lnoint: it represents the total no of transactions
treeclass: it represents the Tree class
finalPatternsdict: it represents to store the patterns

Methods:

mine(): Mining process will start from here
getPatterns(): Complete set of patterns will be retrieved with this function
save(oFile): Complete set of frequent patterns will be loaded in to a output file
getPatternsAsDataFrame(): Complete set of frequent patterns will be loaded in to a dataframe
getMemoryUSS(): Total amount of USS memory consumed by the mining process will be retrieved from this function
getMemoryRSS(): Total amount of RSS memory consumed by the mining process will be retrieved from this function
getRuntime(): Total amount of runtime taken by the mining process will be retrieved from this function
creatingItemSets(): Scans the dataset or dataframes and stores in list format
partialPeriodicOneItem(): Extracts the one-frequent patterns from transactions
updateTransactions(): updates the transactions by removing the aperiodic items and sort the transactions with items by decreasing support
buildTree(): constrcuts the main tree by setting the root node as null
mine(): main program to mine the partial periodic patterns

Executing the code on terminal:

Format:

>>> python3 PPPGrowth.py <inputFile> <outputFile> <minPS> <period>

Examples:

>>> python3 PPPGrowth.py sampleDB.txt patterns.txt 10.0 2.0

Sample run of the importing code:

from PAMI.periodicFrequentPattern.basic import PPPGrowth as alg

obj = alg.PPPGrowth(iFile, minPS, period)

obj.startMine()

partialPeriodicPatterns = obj.getPatterns()

print("Total number of partial periodic Patterns:", len(partialPeriodicPatterns))

obj.save(oFile)

Df = obj.getPatternInDf()

memUSS = obj.getMemoryUSS()

print("Total Memory in USS:", memUSS)

memRSS = obj.getMemoryRSS()

print("Total Memory in RSS", memRSS)

run = obj.getRuntime()

print("Total ExecutionTime in seconds:", run)

Credits:

The complete program was written by P.Likhitha under the supervision of Professor Rage Uday Kiran.

getMemoryRSS() → float[source]

Total amount of RSS memory consumed by the mining process will be retrieved from this function

Returns:: returning RSS memory consumed by the mining process
Return type:: float

getMemoryUSS() → float[source]

Total amount of USS memory consumed by the mining process will be retrieved from this function

Returns:: returning USS memory consumed by the mining process
Return type:: float

getPatterns()[source]

Function to send the set of frequent patterns after completion of the mining process

Returns:: returning frequent patterns
Return type:: dict

getPatternsAsDataFrame()[source]

Storing final frequent patterns in a dataframe

Returns:: returning frequent patterns in a dataframe
Return type:: pd.DataFrame

getRuntime() → float[source]

Calculating the total amount of runtime taken by the mining process

Returns:: returning total amount of runtime taken by the mining process
Return type:: float

printResults() → None[source]: this function is used to print the results

save(outFile: str)[source]

Complete set of frequent patterns will be loaded in to an output file

Parameters:: outFile (csv file) – name of the output file

startMine() → None[source]: Main method where the patterns are mined by constructing tree.

PAMI.partialPeriodicPattern.basic.Gabstract module

PAMI.partialPeriodicPattern.basic.PPPGrowth module

class PAMI.partialPeriodicPattern.basic.PPPGrowth.PPPGrowth(iFile, minPS, period, sep='\t')[source]

Bases: _partialPeriodicPatterns

Description:

3pgrowth is fundamental approach to mine the partial periodic patterns in temporal database.

Reference:

Discovering Partial Periodic Itemsets in Temporal Databases,SSDBM ‘17: Proceedings of the 29th International Conference on Scientific and Statistical Database ManagementJune 2017 Article No.: 30 Pages 1–6https://doi.org/10.1145/3085504.3085535

Parameters:

iFile – str : Name of the Input file to mine complete set of frequent pattern’s
oFile – str : Name of the output file to store complete set of frequent patterns
minPS – float: Minimum partial periodic pattern…
period – float: Minimum partial periodic…
sep – str : This variable is used to distinguish items from one another in a transaction. The default seperator is tab space. However, the users can override their default separator.

Attributes:

iFilefile: Name of the Input file or path of the input file
oFilefile: Name of the output file or path of the output file
minPS: float or int or str: The user can specify minPS either in count or proportion of database size. If the program detects the data type of minPS is integer, then it treats minPS is expressed in count. Otherwise, it will be treated as float. Example: minPS=10 will be treated as integer, while minPS=10.0 will be treated as float
period: float or int or str: The user can specify period either in count or proportion of database size. If the program detects the data type of period is integer, then it treats period is expressed in count. Otherwise, it will be treated as float. Example: period=10 will be treated as integer, while period=10.0 will be treated as float
sepstr: This variable is used to distinguish items from one another in a transaction. The default seperator is tab space or . However, the users can override their default separator.
memoryUSSfloat: To store the total amount of USS memory consumed by the program
memoryRSSfloat: To store the total amount of RSS memory consumed by the program
startTime:float: To record the start time of the mining process
endTime:float: To record the completion time of the mining process
Databaselist: To store the transactions of a database in list
mapSupportDictionary: To maintain the information of item and their frequency
lnoint: it represents the total no of transactions
treeclass: it represents the Tree class
finalPatternsdict: it represents to store the patterns

Methods:

mine(): Mining process will start from here
getPatterns(): Complete set of patterns will be retrieved with this function
save(oFile): Complete set of frequent patterns will be loaded in to a output file
getPatternsAsDataFrame(): Complete set of frequent patterns will be loaded in to a dataframe
getMemoryUSS(): Total amount of USS memory consumed by the mining process will be retrieved from this function
getMemoryRSS(): Total amount of RSS memory consumed by the mining process will be retrieved from this function
getRuntime(): Total amount of runtime taken by the mining process will be retrieved from this function
creatingItemSets(): Scans the dataset or dataframes and stores in list format
partialPeriodicOneItem(): Extracts the one-frequent patterns from transactions
updateTransactions(): updates the transactions by removing the aperiodic items and sort the transactions with items by decreasing support
buildTree(): constrcuts the main tree by setting the root node as null
mine(): main program to mine the partial periodic patterns

Executing the code on terminal:

Format:

(.venv) $python3 PPPGrowth.py <inputFile> <outputFile> <minPS> <period>

Examples:

(.venv) $ python3 PPPGrowth.py sampleDB.txt patterns.txt 10.0 2.0

Sample run of the importing code:

    from PAMI.periodicFrequentPattern.basic import PPPGrowth as alg

    obj = alg.PPPGrowth(iFile, minPS, period)

    obj.startMine()

    partialPeriodicPatterns = obj.getPatterns()

    print("Total number of partial periodic Patterns:", len(partialPeriodicPatterns))

    obj.save(oFile)

    Df = obj.getPatternInDf()

    memUSS = obj.getMemoryUSS()

    print("Total Memory in USS:", memUSS)

    memRSS = obj.getMemoryRSS()

    print("Total Memory in RSS", memRSS)

        run = obj.getRuntime()

print("Total ExecutionTime in seconds:", run)

Credits:

The complete program was written by P.Likhitha under the supervision of Professor Rage Uday Kiran.

Mine() → None[source]: Main method where the patterns are mined by constructing tree. :return: None

getMemoryRSS() → float[source]

Total amount of RSS memory consumed by the mining process will be retrieved from this function

Returns:: returning RSS memory consumed by the mining process
Return type:: float

getMemoryUSS() → float[source]

Total amount of USS memory consumed by the mining process will be retrieved from this function

Returns:: returning USS memory consumed by the mining process
Return type:: float

getPatterns() → Dict[str, int][source]

Function to send the set of frequent patterns after completion of the mining process

Returns:: returning frequent patterns
Return type:: dict

getPatternsAsDataFrame() → DataFrame[source]

Storing final frequent patterns in a dataframe

Returns:: returning frequent patterns in a dataframe
Return type:: pd.DataFrame

getRuntime() → float[source]

Calculating the total amount of runtime taken by the mining process

Returns:: returning total amount of runtime taken by the mining process
Return type:: float

printResults() → None[source]: This function is used to print the results :return: None

save(outFile: str) → None[source]

Complete set of frequent patterns will be loaded in to a output file

Parameters:: outFile (csv file) – name of the output file
Returns:: None

startMine() → None[source]: Main method where the patterns are mined by constructing tree. :return: None

PAMI.partialPeriodicPattern.basic.PPP_ECLAT module

class PAMI.partialPeriodicPattern.basic.PPP_ECLAT.PPP_ECLAT(iFile, minPS, period, sep='\t')[source]

Bases: _partialPeriodicPatterns

Descripition:

3pEclat is the fundamental approach to mine the partial periodic frequent patterns.

Reference:

R. Uday Kirana,b,∗ , J.N. Venkateshd, Masashi Toyodaa , Masaru Kitsuregawaa,c , P. Krishna Reddy Discovering partial periodic-frequent patterns in a transactional database https://www.tkl.iis.u-tokyo.ac.jp/new/uploads/publication_file/file/774/JSS_2017.pdf

Parameters:

iFile – str : Name of the Input file to mine complete set of frequent pattern’s
oFile – str : Name of the output file to store complete set of frequent patterns
minPS – float: Minimum partial periodic pattern…
period – float: Minimum partial periodic…
sep – str : This variable is used to distinguish items from one another in a transaction. The default seperator is tab space. However, the users can override their default separator.

Attributes:

self.iFilefile: Name of the Input file or path of the input file
self. oFilefile: Name of the output file or path of the output file
minPS: float or int or str: The user can specify minPS either in count or proportion of database size. If the program detects the data type of minPS is integer, then it treats minPS is expressed in count. Otherwise, it will be treated as float. Example: minPS=10 will be treated as integer, while minPS=10.0 will be treated as float
period: float or int or str: The user can specify period either in count or proportion of database size. If the program detects the data type of period is integer, then it treats period is expressed in count. Otherwise, it will be treated as float. Example: period=10 will be treated as integer, while period=10.0 will be treated as float
sepstr: This variable is used to distinguish items from one another in a transaction. The default seperator is tab space or . However, the users can override their default separator.
memoryUSSfloat: To store the total amount of USS memory consumed by the program
memoryRSSfloat: To store the total amount of RSS memory consumed by the program
startTime:float: To record the start time of the mining process
endTime:float: To record the completion time of the mining process
Databaselist: To store the transactions of a database in list
mapSupportDictionary: To maintain the information of item and their frequency
lnoint: it represents the total no of transactions
treeclass: it represents the Tree class
finalPatternsdict: it represents to store the patterns
tidListdict: stores the timestamps of an item

Methods:

mine(): Mining process will start from here
getPatterns(): Complete set of patterns will be retrieved with this function
save(oFile): Complete set of frequent patterns will be loaded in to an output file
getPatternsAsDataFrame(): Complete set of frequent patterns will be loaded in to a dataframe
getMemoryUSS(): Total amount of USS memory consumed by the mining process will be retrieved from this function
getMemoryRSS(): Total amount of RSS memory consumed by the mining process will be retrieved from this function
getRuntime(): Total amount of runtime taken by the mining process will be retrieved from this function
creatingOneitemSets(): Scan the database and store the items with their timestamps which are periodic frequent
getPeriodAndSupport(): Calculates the support and period for a list of timestamps.
Generation(): Used to implement prefix class equivalence method to generate the periodic patterns recursively

Executing the code on terminal:

Format:

(.venv) $ python3 PPP_ECLAT.py <inputFile> <outputFile> <minPS> <period>

Examples:

(.venv) $ python3 PPP_ECLAT.py sampleDB.txt patterns.txt 0.3 0.4

Sample run of importing the code:

… code-block:: python

from PAMI.periodicFrequentPattern.basic import PPP_ECLAT as alg

obj = alg.PPP_ECLAT(iFile, minPS,period)

obj.mine()

Patterns = obj.getPatterns()

print(“Total number of partial periodic patterns:”, len(Patterns))

obj.save(oFile)

Df = obj.getPatternsAsDataFrame()

memUSS = obj.getMemoryUSS()

print(“Total Memory in USS:”, memUSS)

memRSS = obj.getMemoryRSS()

print(“Total Memory in RSS”, memRSS)

run = obj.getRuntime()

print(“Total ExecutionTime in seconds:”, run)

Credits:

The complete program was written by P.RaviKumar under the supervision of Professor Rage Uday Kiran.

Mine() → None[source]: Main program start with extracting the periodic frequent items from the database and performs prefix equivalence to form the combinations and generates partial-periodic patterns. :return: None

getMemoryRSS() → float[source]

Total amount of RSS memory consumed by the mining process will be retrieved from this function

Returns:: returning RSS memory consumed by the mining process
Return type:: float

getMemoryUSS() → float[source]

Total amount of USS memory consumed by the mining process will be retrieved from this function

Returns:: returning USS memory consumed by the mining process
Return type:: float

getPatterns() → Dict[str, int][source]

Function to send the set of frequent patterns after completion of the mining process

Returns:: returning frequent patterns
Return type:: dict

getPatternsAsDataFrame() → DataFrame[source]

Storing final frequent patterns in a dataframe

Returns:: returning frequent patterns in a dataframe
Return type:: pd.DataFrame

getRuntime() → float[source]

Calculating the total amount of runtime taken by the mining process

Returns:: returning total amount of runtime taken by the mining process
Return type:: float

printResults() → None[source]: This function is used to print the results :return: None

save(outFile: str) → None[source]

Complete set of frequent patterns will be loaded in to an output file

Parameters:: outFile (file) – name of the output file
Returns:: None

startMine() → None[source]: Main program start with extracting the periodic frequent items from the database and performs prefix equivalence to form the combinations and generates partial-periodic patterns. :return: None

PAMI.partialPeriodicPattern.basic package

Submodules

PAMI.partialPeriodicPattern.basic.GThreePGrowth module

Executing the code on terminal:

Sample run of the importing code:

Credits:

PAMI.partialPeriodicPattern.basic.Gabstract module

PAMI.partialPeriodicPattern.basic.PPPGrowth module

Executing the code on terminal:

Sample run of the importing code:

Credits:

PAMI.partialPeriodicPattern.basic.PPP_ECLAT module

Executing the code on terminal:

Sample run of importing the code:

Credits:

PAMI.partialPeriodicPattern.basic.abstract module

Module contents